CDS

Accession Number TCMCG078C13421
gbkey CDS
Protein Id KAG0472875.1
Location complement(join(12210222..12210359,12210490..12210699,12214486..12214659))
Organism Vanilla planifolia
locus_tag HPP92_014732

Protein

Length 173aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633886, BioSample:SAMN14973820
db_source JADCNL010000007.1
Definition hypothetical protein HPP92_014732 [Vanilla planifolia]
Locus_tag HPP92_014732

EGGNOG-MAPPER Annotation

COG_category A
Description U5 small nuclear ribonucleoprotein
KEGG_TC -
KEGG_Module M00354        [VIEW IN KEGG]
M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12854        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCAGCATTATTCTTGGCGTGAAATCCTGCAAGGGGCCTTTTTTATTTCTGTGGCACTGGACTTGTCCACTAGCACAGCAGTACATTGGAATTACTGTCAGGAAGCCTTTGCAGAGTTTCTTGTCCCGAAATCTGTTATGCCTGGCTTGCTGCGGCAGGAAAGCATCAAGGTTGTTCTCTCCAGCGAGGAATTTAAATACGTGACTGTGAGGCAAGATGAGAAAATGGAGTTAGCAAAGCTCTTAGATCGTGTTCCCATCCCAGTCAAAAAAAGCTTAGAAGAGCCTAGTGCTAAGATTAACGTTCTTCTACAGGCGTATATATCTCAGCTGAAGCTTGAGGGTCTTTCATTGATGTCAGACATGGTTTTCATAAGACAGAGTGTCGGTCGTCTTCTACTCGCTTTATTTGAAATTTTCTTGAAGAGGGGATGGGCACGGTTAGCTGAGAAGGCTCTGAATCTGTGCAAGATGGTTGATAAACGCATGTGGAGTGTACAGACACCATTGAAATTTTAA
Protein:  
MAQHYSWREILQGAFFISVALDLSTSTAVHWNYCQEAFAEFLVPKSVMPGLLRQESIKVVLSSEEFKYVTVRQDEKMELAKLLDRVPIPVKKSLEEPSAKINVLLQAYISQLKLEGLSLMSDMVFIRQSVGRLLLALFEIFLKRGWARLAEKALNLCKMVDKRMWSVQTPLKF